{
  "_id": "6a1f0ae8b401979e7341c61d",
  "Package": "pedbuildr",
  "Title": "Pedigree Reconstruction",
  "Version": "0.3.0.9000",
  "Authors@R": "person(\"Magnus Dehli\", \"Vigeland\", , \"m.d.vigeland@medisin.uio.no\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-9134-4962\"))",
  "Description": "Reconstruct pedigrees from genotype data, by optimising\nthe likelihood over all possible pedigrees subject to given\nrestrictions. Tailor-made plots facilitate evaluation of the\noutput. This package is part of the 'pedsuite' ecosystem for\npedigree analysis. In particular, it imports 'pedprobr' for\ncalculating pedigree likelihoods and 'forrel' for estimating\npairwise relatedness.",
  "License": "GPL-3",
  "URL": "https://github.com/magnusdv/pedbuildr",
  "BugReports": "https://github.com/magnusdv/pedbuildr/issues",
  "Encoding": "UTF-8",
  "Language": "en-GB",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "Repository": "https://magnusdv.r-universe.dev",
  "Date/Publication": "2025-09-09 10:50:26 UTC",
  "RemoteUrl": "https://github.com/magnusdv/pedbuildr",
  "RemoteRef": "HEAD",
  "RemoteSha": "d67bd59afe99e597172fc669d355abb267f6221c",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-17 12:08:39 UTC",
    "User": "root"
  },
  "Author": "Magnus Dehli Vigeland [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-9134-4962>)",
  "Maintainer": "Magnus Dehli Vigeland <m.d.vigeland@medisin.uio.no>",
  "MD5sum": "0bb594cf595180961142a08173d548a6",
  "_user": "magnusdv",
  "_type": "src",
  "_file": "pedbuildr_0.3.0.9000.tar.gz",
  "_fileid": "45ef9286ec93e4acc7628f2e3207cec25a27f81f4e8c4679e08d17400471476b",
  "_filesize": 267823,
  "_sha256": "45ef9286ec93e4acc7628f2e3207cec25a27f81f4e8c4679e08d17400471476b",
  "_created": "2026-05-17T12:08:39.000Z",
  "_published": "2026-06-02T16:55:04.846Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79125679053,
      "time": 127,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7042272902"
    },
    {
      "job": 79125678761,
      "time": 129,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7042273118"
    },
    {
      "job": 79125678780,
      "time": 105,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7042270102"
    },
    {
      "job": 79125678914,
      "time": 105,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7042270134"
    },
    {
      "job": 79125678393,
      "time": 143,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7042257510"
    },
    {
      "job": 79125677985,
      "time": 112,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7364357390"
    },
    {
      "job": 79125679049,
      "time": 103,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7042270235"
    },
    {
      "job": 79125679004,
      "time": 95,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7042270020"
    },
    {
      "job": 79125678887,
      "time": 103,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7042270056"
    }
  ],
  "_buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/magnusdv/pedbuildr",
  "_commit": {
    "id": "d67bd59afe99e597172fc669d355abb267f6221c",
    "author": "Magnus Dehli Vigeland <magnusdv@medisin.uio.no>",
    "committer": "Magnus Dehli Vigeland <magnusdv@medisin.uio.no>",
    "message": "Minor updates\n",
    "time": 1757415026
  },
  "_maintainer": {
    "name": "Magnus Dehli Vigeland",
    "email": "m.d.vigeland@medisin.uio.no",
    "orcid": "0000-0002-9134-4962"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "pedtools",
      "version": ">= 2.2.0",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "forrel",
      "version": ">= 1.5.0",
      "role": "Imports"
    },
    {
      "package": "glue",
      "role": "Imports"
    },
    {
      "package": "pedmut",
      "role": "Imports"
    },
    {
      "package": "pedprobr",
      "role": "Imports"
    },
    {
      "package": "ribd",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "magnusdv",
  "_selfowned": true,
  "_usedby": 1,
  "_updates": [
    {
      "week": "2025-37",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "pedigree-reconstruction",
    "pedsuite",
    "relatedness",
    "relationship-prediction"
  ],
  "_stars": 3,
  "_contributors": [
    {
      "user": "magnusdv",
      "count": 162,
      "uuid": 5310284
    }
  ],
  "_userbio": {
    "uuid": 5310284,
    "type": "user",
    "name": "Magnus Dehli Vigeland",
    "description": "Statistical geneticist"
  },
  "_downloads": {
    "count": 246,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pedbuildr"
  },
  "_devurl": "https://github.com/magnusdv/pedbuildr",
  "_searchresults": 7,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/pedbuildr.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/magnusdv/pedbuildr",
  "_realowner": "magnusdv",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.2.1",
      "date": "2021-03-16"
    },
    {
      "version": "0.3.0",
      "date": "2023-08-22"
    }
  ],
  "_exports": [
    "buildPeds",
    "reconstruct"
  ],
  "_datasets": [
    {
      "name": "trioData",
      "title": "Reconstruction example with three individuals",
      "object": "trioData",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "<1>",
        "<2>",
        "<3>",
        "<4>",
        "<5>",
        "<6>",
        "<7>",
        "<8>",
        "<9>",
        "<10>",
        "<11>",
        "<12>",
        "<13>",
        "<14>",
        "<15>",
        "<16>",
        "<17>",
        "<18>",
        "<19>",
        "<20>",
        "<21>",
        "<22>",
        "<23>",
        "<24>",
        "<25>",
        "<26>",
        "<27>",
        "<28>",
        "<29>",
        "<30>",
        "<31>",
        "<32>",
        "<33>",
        "<34>",
        "<35>",
        "<36>",
        "<37>",
        "<38>",
        "<39>",
        "<40>",
        "<41>",
        "<42>",
        "<43>",
        "<44>",
        "<45>",
        "<46>",
        "<47>",
        "<48>",
        "<49>",
        "<50>",
        "<51>",
        "<52>",
        "<53>",
        "<54>",
        "<55>",
        "<56>",
        "<57>",
        "<58>",
        "<59>",
        "<60>",
        "<61>",
        "<62>",
        "<63>",
        "<64>",
        "<65>",
        "<66>",
        "<67>",
        "<68>",
        "<69>",
        "<70>",
        "<71>",
        "<72>",
        "<73>",
        "<74>",
        "<75>",
        "<76>",
        "<77>",
        "<78>",
        "<79>",
        "<80>",
        "<81>",
        "<82>",
        "<83>",
        "<84>",
        "<85>",
        "<86>",
        "<87>",
        "<88>",
        "<89>",
        "<90>",
        "<91>",
        "<92>",
        "<93>",
        "<94>",
        "<95>",
        "<96>",
        "<97>",
        "<98>",
        "<99>",
        "<100>"
      ],
      "rows": 3,
      "table": true,
      "tojson": true
    },
    {
      "name": "Tutankhamun",
      "title": "Pedigree of Tutankhamun",
      "object": "Tutankhamun",
      "class": [
        "ped"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "buildPeds",
      "title": "Build a list of pedigrees",
      "topics": [
        "buildPeds"
      ]
    },
    {
      "page": "reconstruct",
      "title": "Pedigree reconstruction",
      "topics": [
        "reconstruct"
      ]
    },
    {
      "page": "trioData",
      "title": "Reconstruction example with three individuals",
      "topics": [
        "trioData"
      ]
    },
    {
      "page": "Tutankhamun",
      "title": "Pedigree of Tutankhamun",
      "topics": [
        "Tutankhamun"
      ]
    }
  ],
  "_readme": "https://github.com/magnusdv/pedbuildr/raw/HEAD/README.md",
  "_rundeps": [
    "evaluate",
    "forrel",
    "glue",
    "highr",
    "kinship2",
    "knitr",
    "lattice",
    "lpSolve",
    "Matrix",
    "pbapply",
    "pedmut",
    "pedprobr",
    "pedtools",
    "quadprog",
    "ribd",
    "slam",
    "verbalisr",
    "xfun",
    "yaml"
  ],
  "_score": 3.6532125137753435,
  "_indexed": true,
  "_nocasepkg": "pedbuildr",
  "_universes": [
    "magnusdv"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:32.000Z",
      "distro": "noble",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "bbf15982dd72257b2e4e835dc9115898ef1f80b0f7bb20c6e5d562c9b2e21c10",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:35.000Z",
      "distro": "noble",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "0bf53b339cb1ec657aad11545dadc37d270dc32e11e1b818e7001b5c5f79e754",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:18.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "5a846b6be61bf666022720621ec24cb4cc2540a5b29a4d3a4c2cad022806c54b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:18.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "f63ee723d069afa363b7a4735eec617dd2504016aa1f6d1adf4d07337358ed8d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:05.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "a3b27d869d86da13f89c13bf65b357a0c865c14ee154f3b151603d77e57a9ac8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:02.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "f32132a63ea708927f7dc4e784cabef05985b2d3952daa53b8eae3f8a94352bc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.3.0.9000",
      "date": "2026-05-17T12:10:02.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "c2c99b59a307a6ff82029fd3bab81e89f0ee6c8ea853d06c4096af7d9aca835e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.3.0.9000",
      "date": "2026-06-02T16:54:46.000Z",
      "commit": "d67bd59afe99e597172fc669d355abb267f6221c",
      "fileid": "dc959d63de55376c77775a6737680d70ae26dbad55eea73c6aa44f8a91853afa",
      "status": "success",
      "buildurl": "https://github.com/r-universe/magnusdv/actions/runs/25990375523"
    }
  ]
}