Type: Package
Package: ibdsim2
Title: Simulation of Chromosomal Regions Shared by Family Members
Version: 2.3.3
Authors@R: 
    person("Magnus Dehli", "Vigeland", , "m.d.vigeland@medisin.uio.no", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-9134-4962"))
Description: Simulation of chromosomal segments shared
        identical-by-descent (IBD) among pedigree members. Using
        sex-specific recombination rates along the human genome
        (Halldorsson et al. (2019) <doi:10.1126/science.aau1043>),
        phased chromosomes are simulated for all pedigree members.
        Applications include calculation of realised relatedness
        coefficients and IBD segment distributions. 'ibdsim2' is part
        of the 'pedsuite' collection of packages for pedigree analysis.
        A detailed presentation of the 'pedsuite', including a separate
        chapter on 'ibdsim2', is available in the book 'Pedigree
        analysis in R' (Vigeland, 2021, ISBN:9780128244302). A 'Shiny'
        app for visualising and comparing IBD distributions is
        available at <https://magnusdv.shinyapps.io/ibdsim2-shiny/>.
License: GPL-3
URL: https://github.com/magnusdv/ibdsim2,
        https://magnusdv.github.io/pedsuite/,
        https://magnusdv.shinyapps.io/ibdsim2-shiny/
Depends: R (>= 4.2.0), pedtools (>= 2.8.0)
Imports: Rcpp, ggplot2, glue, ribd (>= 1.7.1)
Suggests: MASS, patchwork, shiny (>= 1.9.0), shinyWidgets, shinyjs,
        testthat, zip
LinkingTo: Rcpp
Config/roxygen2/version: 8.0.0
Encoding: UTF-8
Language: en-GB
LazyData: true
Roxygen: list(markdown = TRUE)
Repository: https://magnusdv.r-universe.dev
Date/Publication: 2026-08-04 18:16:45 UTC
RemoteUrl: https://github.com/magnusdv/ibdsim2
RemoteRef: HEAD
RemoteSha: 86c3f7be04120986474dc2ec086a92682e67bf50
NeedsCompilation: yes
Packaged: 2026-10-13 20:03:04 UTC; root
Author: Magnus Dehli Vigeland [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-9134-4962>)
Maintainer: Magnus Dehli Vigeland <m.d.vigeland@medisin.uio.no>