Package: paramlink2 1.0.6

Magnus Dehli Vigeland

paramlink2: Parametric Linkage Analysis

Parametric linkage analysis of monogenic traits in medical pedigrees. Features include singlepoint analysis, multipoint analysis via 'MERLIN' (Abecasis et al. (2002) <doi:10.1038/ng786>), visualisation of log of the odds (LOD) scores and summaries of linkage peaks. Disease models may be specified to accommodate phenocopies, reduced penetrance and liability classes. 'paramlink2' is part of the 'pedsuite' package ecosystem, presented in 'Pedigree Analysis in R' (Vigeland, 2021, ISBN:9780128244302).

Authors:Magnus Dehli Vigeland [aut, cre]

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Bug tracker:https://github.com/magnusdv/paramlink2/issues

On CRAN:

5 exports 3 stars 1.26 score 12 dependencies 1 dependents 5 scripts 208 downloads

Last updated 11 days agofrom:243d57dc08. Checks:OK: 7. Indexed: yes.

Exports:diseaseModellodlodPeaksmerlinLodpeakSummary

Dependencies:evaluatehighrkinship2knitrlatticeMatrixpedmutpedprobrpedtoolsquadprogxfunyaml