Installation | A quick tour | 1. Create a pedigree (pedtools) | 2. Calculate the inbreeding coefficient (ribd) | 3. Realised inbreeding (ibdsim2) | 4. Marker simulation (forrel) | 5. Inference of pairwise relationships (forrel) | Where to go from here
Package: pedsuite 1.4.0
Magnus Dehli Vigeland
pedsuite: Easy Installation of the 'pedsuite' Packages for Pedigree Analysis
The 'pedsuite' is a collection of packages for pedigree analysis, covering applications in forensic genetics, medical genetics and more. A detailed presentation of the 'pedsuite' is given in the book 'Pedigree Analysis in R' (Vigeland, 2021, ISBN: 9780128244302).
Authors:
pedsuite_1.4.0.tar.gz
pedsuite_1.4.0.zip(r-4.7)pedsuite_1.4.0.zip(r-4.6)pedsuite_1.4.0.zip(r-4.5)
pedsuite_1.4.0.tgz(r-4.6-any)pedsuite_1.4.0.tgz(r-4.5-any)
pedsuite_1.4.0.tar.gz(r-4.7-any)pedsuite_1.4.0.tar.gz(r-4.6-any)
pedsuite_1.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
pedsuite/json (API)
| # Install 'pedsuite' in R: |
| install.packages('pedsuite', repos = c('https://magnusdv.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/magnusdv/pedsuite/issues
Pkgdown/docs site:https://magnusdv.github.io
Last updated from:9b7fe0ba4c. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 153 | ||
| source / vignettes | OK | 183 | ||
| linux-release-x86_64 | OK | 154 | ||
| macos-release-arm64 | OK | 137 | ||
| macos-oldrel-arm64 | OK | 122 | ||
| windows-devel | OK | 111 | ||
| windows-release | OK | 108 | ||
| windows-oldrel | OK | 104 | ||
| wasm-release | OK | 147 |
Exports:
Dependencies:clicpp11dvirevaluatefarverforrelggplot2gluegtablehighribdfindribdsim2isobandkinship2knitrlabelinglatticelifecyclelpSolveMatrixmirainanonextnorSTRparamlink2pedbuildrpedFamiliaspedmutpedprobrpedtoolsquadprogR6RColorBrewerRcppribdrlangS7scalessegregatrslamvctrsverbalisrviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
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