Package: pedbuildr 0.4.0

Magnus Dehli Vigeland

pedbuildr: Pedigree Reconstruction

Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.

Authors:Magnus Dehli Vigeland [aut, cre]

pedbuildr_0.4.0.tar.gz
pedbuildr_0.4.0.zip(r-4.7)pedbuildr_0.4.0.zip(r-4.6)pedbuildr_0.4.0.zip(r-4.5)
pedbuildr_0.4.0.tgz(r-4.6-any)pedbuildr_0.4.0.tgz(r-4.5-any)
pedbuildr_0.4.0.tar.gz(r-4.7-any)pedbuildr_0.4.0.tar.gz(r-4.6-any)
pedbuildr_0.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
pedbuildr/json (API)

# Install 'pedbuildr' in R:
install.packages('pedbuildr', repos = c('https://magnusdv.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/magnusdv/pedbuildr/issues

Datasets:

On CRAN:

Conda:

pedigree-reconstructionpedsuiterelatednessrelationship-prediction

4.13 score 3 stars 1 packages 5 scripts 285 downloads 2 exports 20 dependencies

Last updated from:d22347d020. Checks:7 OK, 2 ERROR. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK141
source / vignettesOK178
linux-release-x86_64OK147
macos-release-arm64OK98
macos-oldrel-arm64ERROR88
windows-develOK83
windows-releaseOK85
windows-oldrelERROR94
wasm-releaseOK121

Exports:buildPedsreconstruct

Dependencies:evaluateforrelgluehighrkinship2knitrlatticelpSolveMatrixmirainanonextpedmutpedprobrpedtoolsquadprogribdslamverbalisrxfunyaml