Package: pedbuildr 0.3.0.9000

Magnus Dehli Vigeland

pedbuildr: Pedigree Reconstruction

Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.

Authors:Magnus Dehli Vigeland [aut, cre]

pedbuildr_0.3.0.9000.tar.gz
pedbuildr_0.3.0.9000.zip(r-4.7)pedbuildr_0.3.0.9000.zip(r-4.6)pedbuildr_0.3.0.9000.zip(r-4.5)
pedbuildr_0.3.0.9000.tgz(r-4.6-any)pedbuildr_0.3.0.9000.tgz(r-4.5-any)
pedbuildr_0.3.0.9000.tar.gz(r-4.7-any)pedbuildr_0.3.0.9000.tar.gz(r-4.6-any)
pedbuildr_0.3.0.9000.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
pedbuildr/json (API)
NEWS

# Install 'pedbuildr' in R:
install.packages('pedbuildr', repos = c('https://magnusdv.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/magnusdv/pedbuildr/issues

Datasets:

On CRAN:

Conda:

pedigree-reconstructionpedsuiterelatednessrelationship-prediction

3.65 score 3 stars 1 packages 7 scripts 246 downloads 2 exports 19 dependencies

Last updated from:d67bd59afe. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK127
source / vignettesOK143
linux-release-x86_64OK129
macos-release-arm64OK105
macos-oldrel-arm64OK105
windows-develOK103
windows-releaseOK103
windows-oldrelOK95
wasm-releaseOK112

Exports:buildPedsreconstruct

Dependencies:evaluateforrelgluehighrkinship2knitrlatticelpSolveMatrixpbapplypedmutpedprobrpedtoolsquadprogribdslamverbalisrxfunyaml