Package: pedbuildr 0.4.0

Magnus Dehli Vigeland

pedbuildr: Pedigree Reconstruction

Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.

Authors:Magnus Dehli Vigeland [aut, cre]

pedbuildr_0.4.0.tar.gz
pedbuildr_0.4.0.zip(r-4.7-any)pedbuildr_0.4.0.zip(r-4.6-any)pedbuildr_0.4.0.zip(r-4.5-any)
pedbuildr_0.4.0.tgz(r-4.6-any)pedbuildr_0.4.0.tgz(r-4.5-any)
pedbuildr_0.4.0.tar.gz(r-4.7-any)pedbuildr_0.4.0.tar.gz(r-4.6-any)
pedbuildr_0.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
pedbuildr/json (API)

# Install 'pedbuildr' in R:
install.packages('pedbuildr', repos = c('https://magnusdv.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/magnusdv/pedbuildr/issues

Datasets:

On CRAN:

Conda:

pedigree-reconstructionpedsuiterelatednessrelationship-prediction

3.95 score 3 stars 1 packages 5 scripts 471 downloads 2 exports 20 dependencies

Last updated from:d22347d020. Checks:6 OK, 1 ERROR. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK107
source / vignettesOK189
linux-releaseOK162
windows-develOK87
windows-releaseOK80
windows-oldrelERROR115
wasm-releaseOK94

Exports:buildPedsreconstruct

Dependencies:evaluateforrelgluehighrkinship2knitrlatticelpSolveMatrixmirainanonextpedmutpedprobrpedtoolsquadprogribdslamverbalisrxfunyaml