Package: pedbuildr 0.3.0.9000

Magnus Dehli Vigeland

pedbuildr: Pedigree Reconstruction

Reconstruct pedigrees from genotype data, by optimising the likelihood over all possible pedigrees subject to given restrictions. Tailor-made plots facilitate evaluation of the output. This package is part of the 'pedsuite' ecosystem for pedigree analysis. In particular, it imports 'pedprobr' for calculating pedigree likelihoods and 'forrel' for estimating pairwise relatedness.

Authors:Magnus Dehli Vigeland [aut, cre]

pedbuildr_0.3.0.9000.tar.gz
pedbuildr_0.3.0.9000.zip(r-4.5)pedbuildr_0.3.0.9000.zip(r-4.4)pedbuildr_0.3.0.9000.zip(r-4.3)
pedbuildr_0.3.0.9000.tgz(r-4.4-any)pedbuildr_0.3.0.9000.tgz(r-4.3-any)
pedbuildr_0.3.0.9000.tar.gz(r-4.5-noble)pedbuildr_0.3.0.9000.tar.gz(r-4.4-noble)
pedbuildr_0.3.0.9000.tgz(r-4.4-emscripten)pedbuildr_0.3.0.9000.tgz(r-4.3-emscripten)
pedbuildr.pdf |pedbuildr.html✨
pedbuildr/json (API)
NEWS

# Install 'pedbuildr' in R:
install.packages('pedbuildr', repos = c('https://magnusdv.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/magnusdv/pedbuildr/issues

Datasets:

On CRAN:

3.48 score 2 stars 1 packages 7 scripts 342 downloads 2 exports 19 dependencies

Last updated 3 months agofrom:953063b156. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 07 2024
R-4.5-winOKNov 07 2024
R-4.5-linuxOKNov 07 2024
R-4.4-winOKNov 07 2024
R-4.4-macOKNov 07 2024
R-4.3-winOKNov 07 2024
R-4.3-macOKNov 07 2024

Exports:buildPedsreconstruct

Dependencies:evaluateforrelgluehighrkinship2knitrlatticeMatrixpbapplypedFamiliaspedmutpedprobrpedtoolsquadprogribdslamverbalisrxfunyaml